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Error installing pts/bioinformatics

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  • Error installing pts/bioinformatics

    When I run:
    Code:
    $ phoronix-test-suite install pts/bioinformatics
    I see the following:
    Code:
    Evaluating External Test Dependencies .................................................. ..............................
    
    Phoronix Test Suite v10.8.4
    
    Installed: pts/himeno-1.3.0
    Installed: pts/mrbayes-1.5.0
    Installed: pts/hmmer-1.3.0
    Installed: pts/mafft-1.6.2
    To Install: pts/qmcpack-1.5.0
    
    Determining File Requirements .................................................. ......................................
    Searching Download Caches .................................................. ..........................................
    
    1 Test To Install
    1200MB Of Disk Space Is Needed
    51 Seconds Estimated Install Time
    
    pts/qmcpack-1.5.0:
    Test Installation 1 of 1
    1 File Needed [111 MB / 1 Minute]
    File Found: qmcpack-3.13.0.tar.gz [111MB]
    Approximate Install Size: 1200 MB
    Estimated Install Time: 51 Seconds
    Installing Test @ 04:20:20
    The installer exited with a non-zero exit status.
    ERROR: /usr/bin/ld: ../../Message/libcatch_main.a(catch_main.cpp.o): undefined reference to symbol 'pthread_create@@GLIBC_2.2.5'
    LOG: ~/.phoronix-test-suite/installed-tests/pts/qmcpack-1.5.0/install-failed.log
    ​
    Any ideas?

    System info:
    Code:
    phoronix-test-suite system-info
    
    
    Phoronix Test Suite v10.8.4
    System Information
    
    
      PROCESSOR:              AMD Ryzen Threadripper 3960X 24-Core @ 3.80GHz
        Core Count:           24                                      
        Thread Count:         48                                      
        Extensions:           SSE 4.2 + AVX2 + AVX + RDRAND + FSGSBASE
        Cache Size:           128 MB                                  
        Microcode:            0x830104d                                
        Core Family:          Zen 2                                    
        Scaling Driver:       acpi-cpufreq ondemand (Boost: Enabled)  
    
      GRAPHICS:               ASUS NVIDIA GeForce RTX 3080 10GB
        Frequency:            1905/9251MHz                                          
        BAR1 / Visible vRAM:  16384 MiB                                            
        OpenGL:               4.6.0                                                
        Vulkan:               1.3.224                                              
        OpenCL:               OpenCL 2.0 AMD-APP (3261.0) + OpenCL 3.0 CUDA 12.0.89
        Display Driver:       NVIDIA 525.60.11                                      
        Monitor:              VG27A                                                
        Screen:               4000x2560                                            
    
      MOTHERBOARD:            ASRock TRX40 Taichi
        BIOS Version:         P1.83                                                    
        Chipset:              AMD Starship/Matisse                                      
        Audio:                NVIDIA Device 1aef                                        
        Network:              Intel I211 + Realtek RTL8125 2.5GbE + Intel Wi-Fi 6 AX200
    
      MEMORY:                 64GB
    
      DISK:                   8 x Samsung SSD 980 PRO 500GB
                          + 2 x Samsung SSD 980 PRO 250GB
                          + 2 x 500GB Samsung SSD 870
        File-System:          zfs              
        Disk Scheduler:       NONE            
    
      OPERATING SYSTEM:       Linuxmint 20.3
        Kernel:               5.15.0-56-generic (x86_64)                                                                                      
        Desktop:              Cinnamon 5.2.7                                                                                                  
        Display Server:       X Server 1.20.13                                                                                                
        Compiler:             GCC 9.4.0                                                                                          ​
    Last edited by junkbustr; 28 March 2023, 04:28 AM.
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