The Performance Impact Of Ubuntu's Wubi Windows Installer: Being developed since 2007 and integrated in Ubuntu since 2008 with their Ubuntu 8.04 LTS release has been Wubi, the Windows-based Ubuntu Installer. While most Linux users tend to install Ubuntu using the LiveCD or the alternate CD installer, by using Wubi you can setup a full desktop from within Microsoft Windows. Wubi places Ubuntu into a disk image still residing on the Windows partition, thereby making it easy to install and remove without risking any problems of messing up your drive's partitions. While Wubi may lower the barrier for entry to trying out an Ubuntu Linux desktop, it does not come without some performance penalties associated to using the loop-mounted device stored on the Microsoft file-system.
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